[1] B. Leitge, A. Kerényi, F. Bogár, G. Paragi, B. Penke, G. Rákhely, Mol. Model. 13 (2007) 1141.
[2] S. Yang, M. Cho, J. Phys. Chem. B. 111 (2007) 605.
[3] R.W. Carrell, D.A. Lomas, Lancet 350 (1997) 134.
[4] L.J. Simons, B.W. Caprathe, M. Callahan, J.M. Graham, T. Kimura, Y. Lai, H. Levine, A.W. Lipinski,
A.T. Sakkab, Y. Tasaki, L.C. Walker, T. Yasunaga, Y.Ye,. N. Zhuang, C.E. Augelli-Szafran, Bioorg. Med. Chem. Lett. 19 (2009) 654.
[5] F.-F. Liu, L. Ji, X.-Y. Dong, Y. Sun, J. Phys. Chem. B 113 (2009) 11320.
[6] D. Ajloo, A.A. Saboury, N. Haghi-Asli, G. Ataei-Jafarai, A.A. Moosavi-Movahedi, , M. Ahmadi, K.
Mahnam, S. Namaki, J. Enzym. Inhib. Med. Chem. 22 (2007) 395.
[7] A.A. Moosavi-Movahedi, S. Safarian, G.H. Hakimelahi, G. Ataei, D. Ajloo, S. Paojehpour, S. Riahi, M.F. Mousavi, S. Mardanyan, N. Soltani, A. Khalafi-Nezhad, H. Sharghi, H. Moghadamnia, A.A. Saboury, Nucleos. Nucleot. Nucl. 23 (2004) 613.
[8] D. Ajloo, A.A. Moosavi-Movahedi, G.H. Hakimelahi, A.A. Saboury, H. Gharibi, Colloids, Surfaces B, Biointerfaces 26 (2002) 185.
[9] A.K. Bordbar, A. Nasehzadeh, D. Ajloo, K. Omidiyan, H. Naghibi, M. Mehrabi, H. Khajehpour, M. Rezaei- Tavirani, A.A. Moosavi-Movahedi, Bull. Korean Chem. Soc. 23 (2002) 1073.
[10] M. Rezaei-Tavirani, A.A. Moosavi-Movahedi, S.Z. Moosavi-Nejad, J. Chamani, D. Ajloo, Thermochim. Acta 408 (2003) 9.
[11] P. Dasmeh, D. J. Searles, D. Ajloo, Denis J. Evans, and Stephen R. Williams, J. Chem. Phys. 131 (2009) 214503.
[12] X. W, G. Narsimhan, Molecular Simulation 35 (2009) 974.
[13] K. Bisetty, H.G. Kruger, J. J. Perez, Molecular Simulation 33 (2007) 1105.
[14] C. Niedermeier, K. Schulten, Molecular Simulation 8 (1992) 361.
[15] D. Ajloo, E. Taghizadeh, A.A. Saboury, E. Bazyari, K. Mahnam, Int. J. Biol. Macromol. 43 (2008) 151.
[16] I.A. Solov’yov, A.V. Yakubovich, A.V. Solov’yov, W. Greiner, Phys. Rev. E 51912 (2007) 1.
[17] I.K. Lednev, A.S. Karnoup, M.C. Sparrow, S.A. Asher, J. Am. Chem. Soc. 123 (2001) 2388.
[18] S. Williams, R.G. Thimothy P. Causgrove, K.S. Fang, R.H. Callender, W.H. Woodruff, R.B. Dyer, Biochemistry 35 (1996) 691.
[19] S. Yang, M. Cho, J. Phys. Chem. B 111 (2007) 605.
[20] A.V. Yakubovich, I.A. Solov’yov, A.V. Solov’yova, W. Greiner Eur. Phys. J. D 51 (2009) 25.
[21] O.V. de Oliveira, A.F. de Moura, L.C.G. Freitas, J. Mol. Struc.-Theochem. 808 (2007) 93.
[22] T. Arakawa, R. Bhat, S.N. Biochemistry 29 (1990) 1914.
[23] Y. Kita, T. Arakawa, T.Y. Lin, S.N. Timasheff, Biochemistry 33 (1994) 15178.
[24] J. Fitter, S. Haber-Pohlmeier, Biochemistry 43 (2004) 9589.
[25] L. Huaa, R. Zhoua, D. Thirumalaic, B. J. Bernea, Proc. Natl. Acad. Sci. USA 105 (2008) 16928.
[26] T.P.E. Mason, G.W. Neilson, C.E. Dempsey, A.C. Barnes, J.M. Cruickshank, Proc. Natl. Acad. Sci. 100 (2003) 4557.
[27] R.L. Baldwin, Biophys. J. 71 (1996) 2056.
[28] K.D. Collins, Proc. Natl. Acad. Sci. USA 92 (1995) 5553.
[29] Q. Zou, S.M. Habermann-Rottingaus, K.P. Murphy, Proteins 31 (1998) 107.
[30] A. Wang, D.W. Bolen, Biochemistry 36 (1997) 9101.
[31] J. Chugh, S. and R.V. Hosour, Arch. Biochem. Biophys. 481 (2009) 169.
[32] A. Zarrine-Afsar, A. Ittermaier, L. Kay, A. Davidson, Protein Sci. 15 (2006) 162.
[33] J.A. Schellman, Biophys. Chem. 96 (2002) 91.
[34] K.D. Collins, Methods 34 (2004) 300.
[35] L.M. Mayr, F.X. Schmid, Biochemistry 32 (1993) 7994.
[36] O.D. Monera, C.M. Kay, R.S. Hodges, Protein Sci. 3 (1994) 1984.
[37] G.I. Makhatadze, M.M. Lopez, J.M. Richardson, S.T. Thomas, Protein Sci. 7 (1998) 689.
[38] A.K. Bhuyan, Biochemistry 41 (2002) 13386.
[39] A.W. Schuttelkopf, D.M. van Aalten, Acta Crystallogr. D 60 (2004) 1355.
[40] W. Weber, P.H. Hunenberger, J.A. McCammon, J. Phys. Chem. B 104 (2000) 3668.
[41] R.E. Bruccoleri, M. Karplus, Biopolymers 29 (1990) 1847.
[42] J.L. Rosas-Trigueros, J. Correa-Basurto, C.G. Benítez- Cardoza, A. Protein Sci. 12 (2011) 2035.
[43] D. Van Der Spoel, E. Lindahl, B. Hess, G. Groenhof, A.E. Mark, H.J. Berendsen, Comput. Chem. 26 (2005) 1701.
[44] W.F. Van Gunsteren, S.R. Billeter, A.A Eising, P.H. Hunenberger, P. Kruger, A.E. Mark, W.R.P. Scott, I.G. Tironi, Biomolecular Simulation: The GROMOS96 Manual and User Guide, Zürich, Switzerland, Groningen, Holland, 1996.
[45] H.J.C. Berendsen, J.P.M. Postma, W.F. van Gunsteren, J. Hermans, in: B. Pullman (Ed.), Interaction Models for Water in Relation to Protein Hydration. In Intermolecular Forces, Reidel: Dordecht, Holland, 1981, pp. 331-342.
[46] L. Verlet, Computer Phys. Rev. 159 (1967) 98.
[47] T. Darden, D. York, L. Pedersen, J. Chem. Phys. 98 (1993) 10089.
[48] B. Hess, H. Bekker, H.J.C. Berendsen, J.G.E.M. Fraaije, Comput. Chem. 18 (1997) 1463.
[49] S. Nosé, Mol. Phys. 52 (1984) 255.
[50] W.G. Hoover, Phys. Rev. A 31 (1985) 1695.
[51] M. Parrinello, A. Rahman, Phys. Rev. Lett. 45 (1980) 1196.
[52] L. Willard, A. Ranjan, H. Zhang, H. Monzavi, R.F. Boyko, B.D. Sykes, D.S. Wishart, Nucleic Acids Res. 31 (2003) 3316.
[53] J.I. Steinfeld, J.S. Francisco, W.L. Hase. Chemical Kinetics and Dynamics Printice-Hall International Edition, New Jersey, 1983.
[54] A.V. Persikov, J.A.M. Ramshaw, B. Brodsky, J. Biol. Chem. 280 (2005) 19343.
[55] K.A. Sharp, B. Madan, J. Phys. Chem. B 101 (1997) 4343.